Please click here for publications from the current year
Please click here for publications from other years
| Author(s) | Title | Year | Citation |
|---|---|---|---|
| Farrukee R, Ait-Goughoulte M, Saunders PM, Londrigan SL, Reading PC | Host Cell Restriction Factors of Paramyxoviruses and Pneumoviruses | 2020 | Viruses. 2020 Dec 2;12(12):E1381 PubMed link doi: 10.3390/v12121381 |
| Sullivan SG, Carlson S, Cheng AC, Chilver MB, Dwyer DE, Irwin M, Kok J, Macartney K, MacLachlan J, Minney-Smith C, Smith D, Stocks N, Taylor J, Barr IG | Where has all the influenza gone? The impact of COVID-19 on the circulation of influenza and other respiratory viruses, Australia, March to September 2020 | 2020 | Euro Surveill. 2020 Nov;25(47) PubMed link doi: 10.2807/1560-7917.ES.2020.25.47.2001847 |
| Khoury DS, Wheatley AK, Ramuta MD, Reynaldi A, Cromer D, Subbarao K, O'Connor DH, Kent SJ, Davenport MP | Measuring immunity to SARS-CoV-2 infection: comparing assays and animal models | 2020 | Nat Rev Immunol 2020 Nov PubMed link doi: 10.1038/s41577-020-00471-1 |
| Tosif S, Neeland MR, Sutton P, Licciardi PV, Sarkar S, Selva KJ, Do LAH, Donato C, Quan Toh Z, Higgins R, Van de Sandt C, Lemke MM, Lee CY, Shoffner SK, Flanagan KL, Arnold KB, Mordant FL, Mulholland K, Bines J, Dohle K, Pellicci DG, Curtis N, McNab S, Steer A, Saffery R, Subbarao K, Chung AW, Kedzierska K, Burgner DP, Crawford NW | Immune responses to SARS-CoV-2 in three children of parents with symptomatic COVID-19 | 2020 | Nat Commun. 2020 Nov 11;11(1):5703 PubMed link doi: 10.1038/s41467-020-19545-8 |
| Lau YC, Perera RAPM, Fang VJ, Luk LH, Chu DKW, Wu P, Barr IG, Peiris JSM, Cowling BJ | Variation by lineage in serum antibody responses to influenza B virus infections | 2020 | PLoS One. 2020 Nov 9;15(11):e0241693 PubMed link doi: 10.1371/journal.pone.0241693 |
| Rockman S, Laurie KL, Parkes S, Wheatley A, Barr IG | New technologies for influenza vaccines | 2020 | Nov 6;8(11):E1745 PubMed link doi:10.3390/microorganisms8111745 |
| Zaraket H, Hurt AC, Clinch B, Barr I, Lee N | Burden of influenza B virus infection and considerations for clinical management | 2020 | Antiviral Res. 2020 Nov 4:104970 PubMed link doi: 10.1016/j.antiviral.2020.104970 |
| Subbarao K | COVID-19 vaccines: time to talk about the uncertainties | 2020 | Nature 2020 Oct PubMed link doi: 10.1038/d41586-020-02944-8 |
| Subbarao K, Mordant F, Rudraraju R | Convalescent plasma treatment for COVID-19: Tempering expectations with the influenza experience | 2020 | Eur J Immunol. 2020 Oct PubMed link doi: 10.1002/eji.202048723 |
| Huddleston J, Barnes JR, Rowe T, Xu X, Kondor R, Wentworth DE, Whittaker L, Ermetal B, Daniels RS, McCauley JW, Fujisaki S, Nakamura K, Kishida N, Watanabe S, Hasegawa H, Barr I, Subbarao K, Barrat-Charlaix P, Neher RA, Bedford T | Integrating genotypes and phenotypes improves long-term forecasts of seasonal influenza A/H3N2 evolution | 2020 | eLife Sep 2 PubMed link doi: 10.7554/eLife.60067 |
| Wille M, Holmes EC | Wild birds as reservoirs for diverse and abundant gamma- and deltacoronaviruses | 2020 | FEMS Microbiol Rev Sep 1 PubMed link doi:10.1093/femsre/fuaa026 |
| Levine MM, Abdullah S, Arabi YM, Darko DM, Durbin AP, Estrada V, Jamrozik E, Kremsner PG, Lagos R, Pitisuttithum P, Plotkin SA, Sauerwein R, Shi SL, Sommerfelt H, Subbarao K, Treanor JJ, Vrati S, King D, Balasingam S, Weller C, Aguilar AO, Cassetti MC, Krause PR, Restrepo AMH | Viewpoint of a WHO Advisory Group Tasked to Consider Establishing a Closely-Monitored Challenge Model of COVID-19 in Healthy Volunteers | 2020 | Clin Infect Dis Aug28 PubMed link doi: 10.1093/cid/ciaa1290 |
| Bond K, Nicholson S, Lim SM, Karapanagiotidis T, Williams E, Johnson D, Hoang T, Sia C, Purcell D, Mordant F, Lewin SR, Catton M, Subbarao K, Howden BP, Williamson DA | Evaluation of serological tests for SARS-CoV-2: Implications for serology testing in a low-prevalence setting | 2020 | J Infect Dis Aug 6 PubMed link doi: 10.1093/infdis/jiaa467 |
| Tepper V, Nykvist M, Gillman A, Skog E, Wille M, Lindström HS, Tang C, Lindberg RH, Lundkvist Å, Järhult JD | Influenza A/H4N2 mallard infection experiments further indicate zanamivir as less prone to induce environmental resistance development than oseltamivir | 2020 | J Gen Virol. 2020 Aug;101(8):816-824 PubMed link doi: 10.1099/jgv.0.001369 |
| Jackson S, Peret TCT, Ziegler TT, Thornburg NJ, Besselaar T, Broor S, Barr I, Baumeister E, Chadha M, Chittaganpitch M, Darmaa B, Ellis J, Fasce R, Herring B, Herve K, Hirve S, Li Y, Pisareva M, Moen A, Naguib A, Palekar R, Potdar V, Siqueira M, Treurnicht F, Tivane A, Venter M, Wairagkar N, Zambon M, Zhang W | Results from the WHO external quality assessment for the respiratory syncytial virus pilot, 2016-17 | 2020 | Influenza Other Respir Viruses Jul 30 PubMed link doi: 10.1111/irv.12771 |
| Doerflinger M, Deng Y, Whitney P, Salvamoser R, Engel S, Kueh AJ, Tai L, Bachem A, Gressier E, Geoghegan ND, Wilcox S, Rogers KL, Garnham AL, Dengler MA, Bader SM, Ebert G, Pearson JS, De Nardo D, Wang N, Yang C, Pereira M, Bryant CE, Strugnell RA, Vince JE, Pellegrini M, Strasser A, Bedoui S, Herold MJ | Flexible usage and interconnectivity of diverse cell death pathways protect against intracelllar infection | 2020 | Immunity Jul 19 PubMed link doi: 10.1016/j.immuni.2020.07.004 |
| Sullivan SG | The need for robust epidemiological evidence during a pandemic | 2020 | Clin Infect Dis Jun 16 PubMed link doi: 10.1093/cid/ciaa770 |
| Juno JA, Tan HX, Lee WS, Reynaldi A, Kelly HG, Wragg K, Esterbauer R, Kent HE, Batten CJ, Mordant FL, Gherardin NA, Pymm P, Dietrich MH, Scott NE, Tham WH, Godfrey DI, Subbarao K, Davenport MP, Kent SJ, Wheatley AK | Humoral and circulating follicular helper T cell responses in recovered patients with COVID-19 | 2020 | Nat Med Jul 13 PubMed link doi: 10.1038/s41591-020-0995-0 |
| Wille M, Harvey E, Shi M, Gonzalez-Acuña D, Holmes EC and Hurt AC | Sustained RNA virome diversity in Antarctic penguins and their ticks | 2020 | ISME J Apr 14 PubMed link doi: 10.1038/s41396-020-0643-1 |
| Koszalka P, Farrukee R, Mifsud E, Vijaykrishna D, Hurt AC | A rapid pyrosequencing assay for the molecular detection of influenza viruses with reduced baloxavir susceptibility due to PA/I38X amino acid substitutions | 2020 | Influenza Other Respir Viruses 14:460-464 PubMed link doi: 10.1111/irv.12725 |
| Wille M, Holmes EC | The Ecology and Evolution of Influenza Viruses | 2020 | Cold Spring Harb Perspect Med Jul 1;10(7):a038489 PubMed link doi: 10.1101/cshperspect.a038489 |
| Lambert PH, Ambrosino DM, Andersen SR, Baric RS, Black SB, Chen RT, Dekker CL, Didierlaurent AM, Graham BS, Martin SD, Molrine DC, Perlman S, Picard-Fraser PA, Pollard AJ, Qin C, Subbarao K, Cramer JP | Consensus summary report for CEPI/BC March 12-13, 2020 meeting: Assessment of risk of disease enhancement with COVID-19 vaccines | 2020 | Vaccine 38:4783-4791 PubMed link doi: 10.1016/j.vaccine.2020.05.064 |
| Nüssing S, Mifsud E, Hensen L, Koutsakos M, Wang Z, Kedzierski L, Mercuri F, Rossignol JF, Hurt AC, Kedzierska K | Viral burden, inflammatory milieu and CD8(+) T-cell responses to influenza virus in a second-generation thiazolide (RM-5061) and oseltamivir combination therapy study | 2020 | Influenza Other Respir Viruses Jun 25 PubMed link doi: 10.1111/irv.12776 |
| Xia J, Adam DC, Moa A, Chughtai AA, Barr IG, Komadina N, MacIntyre CR | Comparative epidemiology, phylogenetics, and transmission patterns of severe influenza A/H3N2 in Australia from 2003 to 2017 | 2020 | Influenza Other Respir Viruses Jun 17 PubMed link doi: 10.1111/irv.12772 |
| Subbarao K, Mahanty S | Respiratory Virus Infections: Understanding COVID-19 | 2020 | Immunity Jun 16;52(6):905-909 PubMed link doi: 10.1016/j.immuni.2020.05.004 |
| Tilmanis D, Koszalka P, Barr IG, Rossignol JF, Mifsud E, Hurt AC | Host-targeted nitazoxanide has a high barrier to resistance but does not reduce the emergence or proliferation of oseltamivir-resistant influenza viruses in vitro or in vivo when used in combination with oseltamivir. | 2020 | Antiviral Res 180:104851 PubMed link doi: 10.1016/j.antiviral.2020.104851 |
| Lam EKS, Morris DH, Hurt AC, Barr IG and Russell CA | The impact of climate and antigenic evolution on seasonal influenza virus epidemics in Australia | 2020 | Nat Commun Jun 2;11(1):2741 PubMed link doi: 10.1038/s41467-020-16545-6 |
| Farrukee R, Tai CM, Oh DY, Anderson DE, Gunalan V, Hibberd M, Lau GY, Barr IG, Messling VV, Maurer-Stroh S, Hurt AC | Utilising animal models to evaluate oseltamivir efficacy against influenza A and B viruses with reduced in vitro susceptibility | 2020 | PLoS Pathog 16:e1008592 PubMed link doi: 10.1371/journal.ppat.1008592 |
| Barr IG, Rynehart C, Whitney P, Druce J | SARS-CoV-2 does not replicate in embryonated hen's eggs or in MDCK cell lines | 2020 | Euro Surveill 25 PubMed link doi: 10.2807/1560-7917.ES.2020.25.25.2001122 |
| Weinman AL, Sullivan SG, Vijaykrishna D, Markey P, Levy A, Miller A and Tong SYC | Epidemiological trends in notified influenza cases in Australia's Northern Territory, 2007-2016 | 2020 | Influenza Other Respir Viruses May 23 PubMed link doi: 10.1111/irv.12757 |
| Bedford JG, Infusini G, Dagley LF, Villalon-Letelier F, Zheng MZM, Bennett-Wood V, Reading PC and Wakim LM | Airway Exosomes Released During Influenza Virus Infection Serve as a Key Component of the Antiviral Innate Immune Response | 2020 | Front Immunol May 12;11:887 PubMed link doi: 10.3389/fimmu.2020.00887 |
| Rockman S, Laurie K, Barr I | Pandemic Influenza Vaccines: What did We Learn from the 2009 Pandemic and are We Better Prepared Now? | 2020 | Vaccines 8(2):E211 PubMed link doi: 10.1371/journal.ppat.1008395 |
| Meischel T, Villalon-Letelier F, Saunders PM, Reading PC and Londrigan SL | Influenza A virus interactions with macrophages: Lessons from epithelial cells | 2020 | Cell Microbiol May;22(5):e13170 PubMed link doi: 10.1111/cmi.13170 |
| Marcelino VR, Clausen P, Buchmann JP, Wille M, Iredell JR, Meyer W, Lund O, Sorrell TC, Holmes EC | CCMetagen: comprehensive and accurate identification of eukaryotes and prokaryotes in metagenomic data | 2020 | Genome Biol 21:103 PubMed link doi: 10.1186/s13059-020-02014-2 |
| Ryan AL, Wadia UD, Jacoby P, Cheung LC, Kerr F, Fraser C, Tapp H, Mechinaud F, Carolan LA, Laurie KL, Barr IG, Blyth CC, Gottardo NG, Richmond PC and Kotecha RS | Immunogenicity of the inactivated influenza vaccine in children who have undergone allogeneic haematopoietic stem cell transplant | 2020 | Bone Marrow Transplant 55(4):773-779 PubMed link doi: 10.1038/s41409-019-0728-5 |
| Mifsud EJ, Tilmanis D, Oh DY, Ming-Kay Tai C, Rossignol JF and Hurt AC | Prophylaxis of ferrets with nitazoxanide and oseltamivir combinations is more effective at reducing the impact of influenza a virus infection compared to oseltamivir monotherapy | 2020 | Antiviral Res Apr;176:104751 PubMed link doi: 10.1016/j.antiviral.2020.104751 |
| Lee LYY, Zhou J, Frise R, Goldhill DH, Koszalka P, Mifsud EJ, Baba K, Noda T, Ando Y, Sato K, Yuki AI, Shishido T, Uehara T, Wildum S, Zwanziger E, Collinson N, Kuhlbusch K, Clinch B, Hurt AC and Barclay WS | Baloxavir treatment of ferrets infected with influenza A(H1N1)pdm09 virus reduces onward transmission | 2020 | PLoS Pathog Apr 15;16(4):e1008395 PubMed link doi: 10.1371/journal.ppat.1008395 |
| Subbarao K | Live attenuated influenza vaccines for pandemic preparedness | 2020 | J Pediatric Infect Dis Soc 19;9(Supplement_1):S15-S18 PubMed link doi: 10.1093/jpids/piz073 |
| Chadha M, Hirve S, Bancej C, Barr I, Baumeister E, Caetano B, Chittaganpitch M, Darmaa B, Ellis J, Fasce R, Kadjo H, Jackson S, Leung V, Pisareva M, Moyes J, Naguib A, Tivane A, Zhang W, Group WRS | Human respiratory syncytial virus and influenza seasonality patterns-Early findings from the WHO global respiratory syncytial virus surveillance | 2020 | Influenza Other Respir Viruses Mar 12 PubMed link doi: 10.1111/irv.12726 |
| Lim WW, Leung NHL, Sullivan SG, Tchetgen Tchetgen EJ and Cowling BJ | Distinguishing causation from correlation in the use of correlates of protection to evaluate and develop influenza vaccines | 2019 | Am J Epidemiol 189(3):185-192 PubMed link doi: 10.1093/aje/kwz227 |
| Takashita E, Daniels RS, Fujisaki S, Gregory V, Gubareva LV, Huang W, Hurt AC, Lackenby A, Nguyen HT, Pereyaslov D, Roe M, Samaan M, Subbarao K, Tse H, Wang D, Yen HL, Zhang W and Meijer A | Global update on the susceptibilities of human influenza viruses to neuraminidase inhibitors and the cap-dependent endonuclease inhibitor baloxavir, 2017-2018 | 2020 | Antiviral Res Mar;175:104718 PubMed link doi: 10.1016/j.antiviral.2020.104718 |
| Vanderven HA, Barr I, Reynaldi A, Wheatley AK, Wines BD, Davenport MP, Hogarth PM and Kent SJ | Fc functional antibody responses to adjuvanted versus unadjuvanted seasonal influenza vaccination in community-dwelling older adults | 2020 | Vaccine Feb 28;38(10):2368-2377 PubMed link doi: 10.1016/j.vaccine.2020.01.066 |
| Londrigan SL, Wakim LM, Smith J, Haverkate AJ, Brooks AG and Reading PC | IFITM3 and type I interferons are important for the control of influenza A virus replication in murine macrophages | 2020 | Virology Jan 15;540:17-22 PubMed link doi: 10.1016/j.virol.2019.11.003 |
| Hung SJ, Hsu YM, Huang SW, Tsai HP, Lee LYY, Hurt AC, Barr IG, Shih SR and Wang JR | Genetic variations on 31 and 450 residues of influenza A nucleoprotein affect viral replication and translation | 2020 | J Biomed Sci 6;27(1):17 PubMed link doi: 10.1186/s12929-019-0612-z |
| Wille M | Unravelling virus community ecology in bats through the integration of metagenomics and community ecology | 2020 | Mol Ecol Jan;29(1):23-25 PubMed link doi: 10.1111/mec.15306 |
| Deng YM, Wong FYK, Spirason N, Kaye M, Beazley R, Grau MLL, Shan S, Stevens V, Subbarao K, Sullivan S, Barr IG, Dhanasekaran V. | Locally Acquired Human Infection with Swine-Origin Influenza A(H3N2) Variant Virus, Australia, 2018. | 2020 | Emerg Infect Dis Jan;26(1):143-147 PubMed link doi: 10.3201/eid2601.191144 |
| Chua H, Feng S, Lewnard JA, Sullivan SG, Blyth CC, Lipsitch M and Cowling BJ | The use of test-negative controls to monitor vaccine effectiveness: a systematic review of methodology | 2020 | Epidemiology Jan;31(1):43-64 PubMed link doi: 10.1097/EDE.0000000000001116 |